Fixed mingw build.

This commit is contained in:
Andrey Kamaev
2012-06-08 03:15:08 +00:00
parent bee982b492
commit f62028dc16
41 changed files with 624 additions and 585 deletions

View File

@@ -74,7 +74,7 @@
namespace cv
{
Retina::Retina(const cv::Size inputSize)
{
_retinaFilter = 0;
@@ -94,19 +94,19 @@ Retina::~Retina()
}
/**
* retreive retina input buffer size
* retreive retina input buffer size
*/
Size Retina::inputSize(){return cv::Size(_retinaFilter->getInputNBcolumns(), _retinaFilter->getInputNBrows());}
/**
* retreive retina output buffer size
* retreive retina output buffer size
*/
Size Retina::outputSize(){return cv::Size(_retinaFilter->getOutputNBcolumns(), _retinaFilter->getOutputNBrows());}
void Retina::setColorSaturation(const bool saturateColors, const float colorSaturationValue)
{
_retinaFilter->setColorSaturation(saturateColors, colorSaturationValue);
_retinaFilter->setColorSaturation(saturateColors, colorSaturationValue);
}
struct Retina::RetinaParameters Retina::getParameters(){return _retinaParameters;}
@@ -121,71 +121,71 @@ void Retina::setup(std::string retinaParameterFile, const bool applyDefaultSetup
setup(fs, applyDefaultSetupOnFailure);
}catch(Exception &e)
{
std::cout<<"Retina::setup: wrong/unappropriate xml parameter file : error report :`n=>"<<e.what()<<std::endl;
if (applyDefaultSetupOnFailure)
{
std::cout<<"Retina::setup: wrong/unappropriate xml parameter file : error report :`n=>"<<e.what()<<std::endl;
if (applyDefaultSetupOnFailure)
{
std::cout<<"Retina::setup: resetting retina with default parameters"<<std::endl;
setupOPLandIPLParvoChannel();
setupIPLMagnoChannel();
}
setupOPLandIPLParvoChannel();
setupIPLMagnoChannel();
}
else
{
std::cout<<"=> keeping current parameters"<<std::endl;
std::cout<<"=> keeping current parameters"<<std::endl;
}
}
}
void Retina::setup(cv::FileStorage &fs, const bool applyDefaultSetupOnFailure)
{
try
{
// read parameters file if it exists or apply default setup if asked for
if (!fs.isOpened())
{
std::cout<<"Retina::setup: provided parameters file could not be open... skeeping configuration"<<std::endl;
return;
// implicit else case : retinaParameterFile could be open (it exists at least)
}
try
{
// read parameters file if it exists or apply default setup if asked for
if (!fs.isOpened())
{
std::cout<<"Retina::setup: provided parameters file could not be open... skeeping configuration"<<std::endl;
return;
// implicit else case : retinaParameterFile could be open (it exists at least)
}
// OPL and Parvo init first... update at the same time the parameters structure and the retina core
cv::FileNode rootFn = fs.root(), currFn=rootFn["OPLandIPLparvo"];
currFn["colorMode"]>>_retinaParameters.OPLandIplParvo.colorMode;
currFn["normaliseOutput"]>>_retinaParameters.OPLandIplParvo.normaliseOutput;
currFn["photoreceptorsLocalAdaptationSensitivity"]>>_retinaParameters.OPLandIplParvo.photoreceptorsLocalAdaptationSensitivity;
currFn["photoreceptorsTemporalConstant"]>>_retinaParameters.OPLandIplParvo.photoreceptorsTemporalConstant;
currFn["photoreceptorsSpatialConstant"]>>_retinaParameters.OPLandIplParvo.photoreceptorsSpatialConstant;
currFn["horizontalCellsGain"]>>_retinaParameters.OPLandIplParvo.horizontalCellsGain;
currFn["hcellsTemporalConstant"]>>_retinaParameters.OPLandIplParvo.hcellsTemporalConstant;
currFn["hcellsSpatialConstant"]>>_retinaParameters.OPLandIplParvo.hcellsSpatialConstant;
currFn["ganglionCellsSensitivity"]>>_retinaParameters.OPLandIplParvo.ganglionCellsSensitivity;
setupOPLandIPLParvoChannel(_retinaParameters.OPLandIplParvo.colorMode, _retinaParameters.OPLandIplParvo.normaliseOutput, _retinaParameters.OPLandIplParvo.photoreceptorsLocalAdaptationSensitivity, _retinaParameters.OPLandIplParvo.photoreceptorsTemporalConstant, _retinaParameters.OPLandIplParvo.photoreceptorsSpatialConstant, _retinaParameters.OPLandIplParvo.horizontalCellsGain, _retinaParameters.OPLandIplParvo.hcellsTemporalConstant, _retinaParameters.OPLandIplParvo.hcellsSpatialConstant, _retinaParameters.OPLandIplParvo.ganglionCellsSensitivity);
cv::FileNode rootFn = fs.root(), currFn=rootFn["OPLandIPLparvo"];
currFn["colorMode"]>>_retinaParameters.OPLandIplParvo.colorMode;
currFn["normaliseOutput"]>>_retinaParameters.OPLandIplParvo.normaliseOutput;
currFn["photoreceptorsLocalAdaptationSensitivity"]>>_retinaParameters.OPLandIplParvo.photoreceptorsLocalAdaptationSensitivity;
currFn["photoreceptorsTemporalConstant"]>>_retinaParameters.OPLandIplParvo.photoreceptorsTemporalConstant;
currFn["photoreceptorsSpatialConstant"]>>_retinaParameters.OPLandIplParvo.photoreceptorsSpatialConstant;
currFn["horizontalCellsGain"]>>_retinaParameters.OPLandIplParvo.horizontalCellsGain;
currFn["hcellsTemporalConstant"]>>_retinaParameters.OPLandIplParvo.hcellsTemporalConstant;
currFn["hcellsSpatialConstant"]>>_retinaParameters.OPLandIplParvo.hcellsSpatialConstant;
currFn["ganglionCellsSensitivity"]>>_retinaParameters.OPLandIplParvo.ganglionCellsSensitivity;
setupOPLandIPLParvoChannel(_retinaParameters.OPLandIplParvo.colorMode, _retinaParameters.OPLandIplParvo.normaliseOutput, _retinaParameters.OPLandIplParvo.photoreceptorsLocalAdaptationSensitivity, _retinaParameters.OPLandIplParvo.photoreceptorsTemporalConstant, _retinaParameters.OPLandIplParvo.photoreceptorsSpatialConstant, _retinaParameters.OPLandIplParvo.horizontalCellsGain, _retinaParameters.OPLandIplParvo.hcellsTemporalConstant, _retinaParameters.OPLandIplParvo.hcellsSpatialConstant, _retinaParameters.OPLandIplParvo.ganglionCellsSensitivity);
// init retina IPL magno setup... update at the same time the parameters structure and the retina core
currFn=rootFn["IPLmagno"];
currFn["normaliseOutput"]>>_retinaParameters.IplMagno.normaliseOutput;
currFn["parasolCells_beta"]>>_retinaParameters.IplMagno.parasolCells_beta;
currFn["parasolCells_tau"]>>_retinaParameters.IplMagno.parasolCells_tau;
currFn["parasolCells_k"]>>_retinaParameters.IplMagno.parasolCells_k;
currFn["amacrinCellsTemporalCutFrequency"]>>_retinaParameters.IplMagno.amacrinCellsTemporalCutFrequency;
currFn["V0CompressionParameter"]>>_retinaParameters.IplMagno.V0CompressionParameter;
currFn["localAdaptintegration_tau"]>>_retinaParameters.IplMagno.localAdaptintegration_tau;
currFn["localAdaptintegration_k"]>>_retinaParameters.IplMagno.localAdaptintegration_k;
// init retina IPL magno setup... update at the same time the parameters structure and the retina core
currFn=rootFn["IPLmagno"];
currFn["normaliseOutput"]>>_retinaParameters.IplMagno.normaliseOutput;
currFn["parasolCells_beta"]>>_retinaParameters.IplMagno.parasolCells_beta;
currFn["parasolCells_tau"]>>_retinaParameters.IplMagno.parasolCells_tau;
currFn["parasolCells_k"]>>_retinaParameters.IplMagno.parasolCells_k;
currFn["amacrinCellsTemporalCutFrequency"]>>_retinaParameters.IplMagno.amacrinCellsTemporalCutFrequency;
currFn["V0CompressionParameter"]>>_retinaParameters.IplMagno.V0CompressionParameter;
currFn["localAdaptintegration_tau"]>>_retinaParameters.IplMagno.localAdaptintegration_tau;
currFn["localAdaptintegration_k"]>>_retinaParameters.IplMagno.localAdaptintegration_k;
setupIPLMagnoChannel(_retinaParameters.IplMagno.normaliseOutput, _retinaParameters.IplMagno.parasolCells_beta, _retinaParameters.IplMagno.parasolCells_tau, _retinaParameters.IplMagno.parasolCells_k, _retinaParameters.IplMagno.amacrinCellsTemporalCutFrequency,_retinaParameters.IplMagno.V0CompressionParameter, _retinaParameters.IplMagno.localAdaptintegration_tau, _retinaParameters.IplMagno.localAdaptintegration_k);
setupIPLMagnoChannel(_retinaParameters.IplMagno.normaliseOutput, _retinaParameters.IplMagno.parasolCells_beta, _retinaParameters.IplMagno.parasolCells_tau, _retinaParameters.IplMagno.parasolCells_k, _retinaParameters.IplMagno.amacrinCellsTemporalCutFrequency,_retinaParameters.IplMagno.V0CompressionParameter, _retinaParameters.IplMagno.localAdaptintegration_tau, _retinaParameters.IplMagno.localAdaptintegration_k);
}catch(Exception &e)
{
std::cout<<"Retina::setup: resetting retina with default parameters"<<std::endl;
if (applyDefaultSetupOnFailure)
{
setupOPLandIPLParvoChannel();
setupIPLMagnoChannel();
}
std::cout<<"Retina::setup: wrong/unappropriate xml parameter file : error report :`n=>"<<e.what()<<std::endl;
std::cout<<"=> keeping current parameters"<<std::endl;
}
}catch(Exception &e)
{
std::cout<<"Retina::setup: resetting retina with default parameters"<<std::endl;
if (applyDefaultSetupOnFailure)
{
setupOPLandIPLParvoChannel();
setupIPLMagnoChannel();
}
std::cout<<"Retina::setup: wrong/unappropriate xml parameter file : error report :`n=>"<<e.what()<<std::endl;
std::cout<<"=> keeping current parameters"<<std::endl;
}
// report current configuration
std::cout<<printSetup()<<std::endl;
// report current configuration
std::cout<<printSetup()<<std::endl;
}
void Retina::setup(cv::Retina::RetinaParameters newConfiguration)
@@ -201,35 +201,35 @@ void Retina::setup(cv::Retina::RetinaParameters newConfiguration)
const std::string Retina::printSetup()
{
std::stringstream outmessage;
std::stringstream outmessage;
// displaying OPL and IPL parvo setup
outmessage<<"Current Retina instance setup :"
<<"\nOPLandIPLparvo"<<"{"
<< "\n==> colorMode : " << _retinaParameters.OPLandIplParvo.colorMode
<< "\n==> normalizeParvoOutput :" << _retinaParameters.OPLandIplParvo.normaliseOutput
<< "\n==> photoreceptorsLocalAdaptationSensitivity : " << _retinaParameters.OPLandIplParvo.photoreceptorsLocalAdaptationSensitivity
<< "\n==> photoreceptorsTemporalConstant : " << _retinaParameters.OPLandIplParvo.photoreceptorsTemporalConstant
<< "\n==> photoreceptorsSpatialConstant : " << _retinaParameters.OPLandIplParvo.photoreceptorsSpatialConstant
<< "\n==> horizontalCellsGain : " << _retinaParameters.OPLandIplParvo.horizontalCellsGain
<< "\n==> hcellsTemporalConstant : " << _retinaParameters.OPLandIplParvo.hcellsTemporalConstant
<< "\n==> hcellsSpatialConstant : " << _retinaParameters.OPLandIplParvo.hcellsSpatialConstant
<< "\n==> parvoGanglionCellsSensitivity : " << _retinaParameters.OPLandIplParvo.ganglionCellsSensitivity
<<"}\n";
// displaying OPL and IPL parvo setup
outmessage<<"Current Retina instance setup :"
<<"\nOPLandIPLparvo"<<"{"
<< "\n==> colorMode : " << _retinaParameters.OPLandIplParvo.colorMode
<< "\n==> normalizeParvoOutput :" << _retinaParameters.OPLandIplParvo.normaliseOutput
<< "\n==> photoreceptorsLocalAdaptationSensitivity : " << _retinaParameters.OPLandIplParvo.photoreceptorsLocalAdaptationSensitivity
<< "\n==> photoreceptorsTemporalConstant : " << _retinaParameters.OPLandIplParvo.photoreceptorsTemporalConstant
<< "\n==> photoreceptorsSpatialConstant : " << _retinaParameters.OPLandIplParvo.photoreceptorsSpatialConstant
<< "\n==> horizontalCellsGain : " << _retinaParameters.OPLandIplParvo.horizontalCellsGain
<< "\n==> hcellsTemporalConstant : " << _retinaParameters.OPLandIplParvo.hcellsTemporalConstant
<< "\n==> hcellsSpatialConstant : " << _retinaParameters.OPLandIplParvo.hcellsSpatialConstant
<< "\n==> parvoGanglionCellsSensitivity : " << _retinaParameters.OPLandIplParvo.ganglionCellsSensitivity
<<"}\n";
// displaying IPL magno setup
outmessage<<"Current Retina instance setup :"
<<"\nIPLmagno"<<"{"
<< "\n==> normaliseOutput : " << _retinaParameters.IplMagno.normaliseOutput
<< "\n==> parasolCells_beta : " << _retinaParameters.IplMagno.parasolCells_beta
<< "\n==> parasolCells_tau : " << _retinaParameters.IplMagno.parasolCells_tau
<< "\n==> parasolCells_k : " << _retinaParameters.IplMagno.parasolCells_k
<< "\n==> amacrinCellsTemporalCutFrequency : " << _retinaParameters.IplMagno.amacrinCellsTemporalCutFrequency
<< "\n==> V0CompressionParameter : " << _retinaParameters.IplMagno.V0CompressionParameter
<< "\n==> localAdaptintegration_tau : " << _retinaParameters.IplMagno.localAdaptintegration_tau
<< "\n==> localAdaptintegration_k : " << _retinaParameters.IplMagno.localAdaptintegration_k
<<"}";
return outmessage.str();
// displaying IPL magno setup
outmessage<<"Current Retina instance setup :"
<<"\nIPLmagno"<<"{"
<< "\n==> normaliseOutput : " << _retinaParameters.IplMagno.normaliseOutput
<< "\n==> parasolCells_beta : " << _retinaParameters.IplMagno.parasolCells_beta
<< "\n==> parasolCells_tau : " << _retinaParameters.IplMagno.parasolCells_tau
<< "\n==> parasolCells_k : " << _retinaParameters.IplMagno.parasolCells_k
<< "\n==> amacrinCellsTemporalCutFrequency : " << _retinaParameters.IplMagno.amacrinCellsTemporalCutFrequency
<< "\n==> V0CompressionParameter : " << _retinaParameters.IplMagno.V0CompressionParameter
<< "\n==> localAdaptintegration_tau : " << _retinaParameters.IplMagno.localAdaptintegration_tau
<< "\n==> localAdaptintegration_k : " << _retinaParameters.IplMagno.localAdaptintegration_k
<<"}";
return outmessage.str();
}
void Retina::write( std::string fs ) const
@@ -240,98 +240,98 @@ void Retina::write( std::string fs ) const
void Retina::write( FileStorage& fs ) const
{
if (!fs.isOpened())
return; // basic error case
fs<<"OPLandIPLparvo"<<"{";
fs << "colorMode" << _retinaParameters.OPLandIplParvo.colorMode;
fs << "normaliseOutput" << _retinaParameters.OPLandIplParvo.normaliseOutput;
fs << "photoreceptorsLocalAdaptationSensitivity" << _retinaParameters.OPLandIplParvo.photoreceptorsLocalAdaptationSensitivity;
fs << "photoreceptorsTemporalConstant" << _retinaParameters.OPLandIplParvo.photoreceptorsTemporalConstant;
fs << "photoreceptorsSpatialConstant" << _retinaParameters.OPLandIplParvo.photoreceptorsSpatialConstant;
fs << "horizontalCellsGain" << _retinaParameters.OPLandIplParvo.horizontalCellsGain;
fs << "hcellsTemporalConstant" << _retinaParameters.OPLandIplParvo.hcellsTemporalConstant;
fs << "hcellsSpatialConstant" << _retinaParameters.OPLandIplParvo.hcellsSpatialConstant;
fs << "ganglionCellsSensitivity" << _retinaParameters.OPLandIplParvo.ganglionCellsSensitivity;
fs << "}";
fs<<"IPLmagno"<<"{";
fs << "normaliseOutput" << _retinaParameters.IplMagno.normaliseOutput;
fs << "parasolCells_beta" << _retinaParameters.IplMagno.parasolCells_beta;
fs << "parasolCells_tau" << _retinaParameters.IplMagno.parasolCells_tau;
fs << "parasolCells_k" << _retinaParameters.IplMagno.parasolCells_k;
fs << "amacrinCellsTemporalCutFrequency" << _retinaParameters.IplMagno.amacrinCellsTemporalCutFrequency;
fs << "V0CompressionParameter" << _retinaParameters.IplMagno.V0CompressionParameter;
fs << "localAdaptintegration_tau" << _retinaParameters.IplMagno.localAdaptintegration_tau;
fs << "localAdaptintegration_k" << _retinaParameters.IplMagno.localAdaptintegration_k;
fs<<"}";
if (!fs.isOpened())
return; // basic error case
fs<<"OPLandIPLparvo"<<"{";
fs << "colorMode" << _retinaParameters.OPLandIplParvo.colorMode;
fs << "normaliseOutput" << _retinaParameters.OPLandIplParvo.normaliseOutput;
fs << "photoreceptorsLocalAdaptationSensitivity" << _retinaParameters.OPLandIplParvo.photoreceptorsLocalAdaptationSensitivity;
fs << "photoreceptorsTemporalConstant" << _retinaParameters.OPLandIplParvo.photoreceptorsTemporalConstant;
fs << "photoreceptorsSpatialConstant" << _retinaParameters.OPLandIplParvo.photoreceptorsSpatialConstant;
fs << "horizontalCellsGain" << _retinaParameters.OPLandIplParvo.horizontalCellsGain;
fs << "hcellsTemporalConstant" << _retinaParameters.OPLandIplParvo.hcellsTemporalConstant;
fs << "hcellsSpatialConstant" << _retinaParameters.OPLandIplParvo.hcellsSpatialConstant;
fs << "ganglionCellsSensitivity" << _retinaParameters.OPLandIplParvo.ganglionCellsSensitivity;
fs << "}";
fs<<"IPLmagno"<<"{";
fs << "normaliseOutput" << _retinaParameters.IplMagno.normaliseOutput;
fs << "parasolCells_beta" << _retinaParameters.IplMagno.parasolCells_beta;
fs << "parasolCells_tau" << _retinaParameters.IplMagno.parasolCells_tau;
fs << "parasolCells_k" << _retinaParameters.IplMagno.parasolCells_k;
fs << "amacrinCellsTemporalCutFrequency" << _retinaParameters.IplMagno.amacrinCellsTemporalCutFrequency;
fs << "V0CompressionParameter" << _retinaParameters.IplMagno.V0CompressionParameter;
fs << "localAdaptintegration_tau" << _retinaParameters.IplMagno.localAdaptintegration_tau;
fs << "localAdaptintegration_k" << _retinaParameters.IplMagno.localAdaptintegration_k;
fs<<"}";
}
void Retina::setupOPLandIPLParvoChannel(const bool colorMode, const bool normaliseOutput, const float photoreceptorsLocalAdaptationSensitivity, const float photoreceptorsTemporalConstant, const float photoreceptorsSpatialConstant, const float horizontalCellsGain, const float HcellsTemporalConstant, const float HcellsSpatialConstant, const float ganglionCellsSensitivity)
{
// retina core parameters setup
_retinaFilter->setColorMode(colorMode);
_retinaFilter->setPhotoreceptorsLocalAdaptationSensitivity(photoreceptorsLocalAdaptationSensitivity);
_retinaFilter->setOPLandParvoParameters(0, photoreceptorsTemporalConstant, photoreceptorsSpatialConstant, horizontalCellsGain, HcellsTemporalConstant, HcellsSpatialConstant, ganglionCellsSensitivity);
_retinaFilter->setParvoGanglionCellsLocalAdaptationSensitivity(ganglionCellsSensitivity);
_retinaFilter->activateNormalizeParvoOutput_0_maxOutputValue(normaliseOutput);
// retina core parameters setup
_retinaFilter->setColorMode(colorMode);
_retinaFilter->setPhotoreceptorsLocalAdaptationSensitivity(photoreceptorsLocalAdaptationSensitivity);
_retinaFilter->setOPLandParvoParameters(0, photoreceptorsTemporalConstant, photoreceptorsSpatialConstant, horizontalCellsGain, HcellsTemporalConstant, HcellsSpatialConstant, ganglionCellsSensitivity);
_retinaFilter->setParvoGanglionCellsLocalAdaptationSensitivity(ganglionCellsSensitivity);
_retinaFilter->activateNormalizeParvoOutput_0_maxOutputValue(normaliseOutput);
// update parameters struture
_retinaParameters.OPLandIplParvo.colorMode = colorMode;
_retinaParameters.OPLandIplParvo.normaliseOutput = normaliseOutput;
_retinaParameters.OPLandIplParvo.photoreceptorsLocalAdaptationSensitivity = photoreceptorsLocalAdaptationSensitivity;
_retinaParameters.OPLandIplParvo.photoreceptorsTemporalConstant = photoreceptorsTemporalConstant;
_retinaParameters.OPLandIplParvo.photoreceptorsSpatialConstant = photoreceptorsSpatialConstant;
_retinaParameters.OPLandIplParvo.horizontalCellsGain = horizontalCellsGain;
_retinaParameters.OPLandIplParvo.hcellsTemporalConstant = HcellsTemporalConstant;
_retinaParameters.OPLandIplParvo.hcellsSpatialConstant = HcellsSpatialConstant;
_retinaParameters.OPLandIplParvo.ganglionCellsSensitivity = ganglionCellsSensitivity;
_retinaParameters.OPLandIplParvo.colorMode = colorMode;
_retinaParameters.OPLandIplParvo.normaliseOutput = normaliseOutput;
_retinaParameters.OPLandIplParvo.photoreceptorsLocalAdaptationSensitivity = photoreceptorsLocalAdaptationSensitivity;
_retinaParameters.OPLandIplParvo.photoreceptorsTemporalConstant = photoreceptorsTemporalConstant;
_retinaParameters.OPLandIplParvo.photoreceptorsSpatialConstant = photoreceptorsSpatialConstant;
_retinaParameters.OPLandIplParvo.horizontalCellsGain = horizontalCellsGain;
_retinaParameters.OPLandIplParvo.hcellsTemporalConstant = HcellsTemporalConstant;
_retinaParameters.OPLandIplParvo.hcellsSpatialConstant = HcellsSpatialConstant;
_retinaParameters.OPLandIplParvo.ganglionCellsSensitivity = ganglionCellsSensitivity;
}
void Retina::setupIPLMagnoChannel(const bool normaliseOutput, const float parasolCells_beta, const float parasolCells_tau, const float parasolCells_k, const float amacrinCellsTemporalCutFrequency, const float V0CompressionParameter, const float localAdaptintegration_tau, const float localAdaptintegration_k)
{
_retinaFilter->setMagnoCoefficientsTable(parasolCells_beta, parasolCells_tau, parasolCells_k, amacrinCellsTemporalCutFrequency, V0CompressionParameter, localAdaptintegration_tau, localAdaptintegration_k);
_retinaFilter->activateNormalizeMagnoOutput_0_maxOutputValue(normaliseOutput);
_retinaFilter->setMagnoCoefficientsTable(parasolCells_beta, parasolCells_tau, parasolCells_k, amacrinCellsTemporalCutFrequency, V0CompressionParameter, localAdaptintegration_tau, localAdaptintegration_k);
_retinaFilter->activateNormalizeMagnoOutput_0_maxOutputValue(normaliseOutput);
// update parameters struture
_retinaParameters.IplMagno.normaliseOutput = normaliseOutput;
_retinaParameters.IplMagno.parasolCells_beta = parasolCells_beta;
_retinaParameters.IplMagno.parasolCells_tau = parasolCells_tau;
_retinaParameters.IplMagno.parasolCells_k = parasolCells_k;
_retinaParameters.IplMagno.amacrinCellsTemporalCutFrequency = amacrinCellsTemporalCutFrequency;
_retinaParameters.IplMagno.V0CompressionParameter = V0CompressionParameter;
_retinaParameters.IplMagno.localAdaptintegration_tau = localAdaptintegration_tau;
_retinaParameters.IplMagno.localAdaptintegration_k = localAdaptintegration_k;
_retinaParameters.IplMagno.normaliseOutput = normaliseOutput;
_retinaParameters.IplMagno.parasolCells_beta = parasolCells_beta;
_retinaParameters.IplMagno.parasolCells_tau = parasolCells_tau;
_retinaParameters.IplMagno.parasolCells_k = parasolCells_k;
_retinaParameters.IplMagno.amacrinCellsTemporalCutFrequency = amacrinCellsTemporalCutFrequency;
_retinaParameters.IplMagno.V0CompressionParameter = V0CompressionParameter;
_retinaParameters.IplMagno.localAdaptintegration_tau = localAdaptintegration_tau;
_retinaParameters.IplMagno.localAdaptintegration_k = localAdaptintegration_k;
}
void Retina::run(const cv::Mat &inputMatToConvert)
{
// first convert input image to the compatible format : std::valarray<float>
const bool colorMode = _convertCvMat2ValarrayBuffer(inputMatToConvert, _inputBuffer);
// process the retina
if (!_retinaFilter->runFilter(_inputBuffer, colorMode, false, _retinaParameters.OPLandIplParvo.colorMode && colorMode, false))
throw cv::Exception(-1, "Retina cannot be applied, wrong input buffer size", "Retina::run", "Retina.h", 0);
// first convert input image to the compatible format : std::valarray<float>
const bool colorMode = _convertCvMat2ValarrayBuffer(inputMatToConvert, _inputBuffer);
// process the retina
if (!_retinaFilter->runFilter(_inputBuffer, colorMode, false, _retinaParameters.OPLandIplParvo.colorMode && colorMode, false))
throw cv::Exception(-1, "Retina cannot be applied, wrong input buffer size", "Retina::run", "Retina.h", 0);
}
void Retina::getParvo(cv::Mat &retinaOutput_parvo)
{
if (_retinaFilter->getColorMode())
{
// reallocate output buffer (if necessary)
_convertValarrayBuffer2cvMat(_retinaFilter->getColorOutput(), _retinaFilter->getOutputNBrows(), _retinaFilter->getOutputNBcolumns(), true, retinaOutput_parvo);
}else
{
// reallocate output buffer (if necessary)
_convertValarrayBuffer2cvMat(_retinaFilter->getContours(), _retinaFilter->getOutputNBrows(), _retinaFilter->getOutputNBcolumns(), false, retinaOutput_parvo);
}
//retinaOutput_parvo/=255.0;
if (_retinaFilter->getColorMode())
{
// reallocate output buffer (if necessary)
_convertValarrayBuffer2cvMat(_retinaFilter->getColorOutput(), _retinaFilter->getOutputNBrows(), _retinaFilter->getOutputNBcolumns(), true, retinaOutput_parvo);
}else
{
// reallocate output buffer (if necessary)
_convertValarrayBuffer2cvMat(_retinaFilter->getContours(), _retinaFilter->getOutputNBrows(), _retinaFilter->getOutputNBcolumns(), false, retinaOutput_parvo);
}
//retinaOutput_parvo/=255.0;
}
void Retina::getMagno(cv::Mat &retinaOutput_magno)
{
// reallocate output buffer (if necessary)
_convertValarrayBuffer2cvMat(_retinaFilter->getMovingContours(), _retinaFilter->getOutputNBrows(), _retinaFilter->getOutputNBcolumns(), false, retinaOutput_magno);
//retinaOutput_magno/=255.0;
// reallocate output buffer (if necessary)
_convertValarrayBuffer2cvMat(_retinaFilter->getMovingContours(), _retinaFilter->getOutputNBrows(), _retinaFilter->getOutputNBcolumns(), false, retinaOutput_magno);
//retinaOutput_magno/=255.0;
}
// original API level data accessors : copy buffers if size matches
@@ -344,110 +344,112 @@ const std::valarray<float> & Retina::getParvo() const {if (_retinaFilter->getCol
// private method called by constructirs
void Retina::_init(const cv::Size inputSize, const bool colorMode, RETINA_COLORSAMPLINGMETHOD colorSamplingMethod, const bool useRetinaLogSampling, const double reductionFactor, const double samplingStrenght)
{
// basic error check
if (inputSize.height*inputSize.width <= 0)
throw cv::Exception(-1, "Bad retina size setup : size height and with must be superior to zero", "Retina::setup", "Retina.h", 0);
// basic error check
if (inputSize.height*inputSize.width <= 0)
throw cv::Exception(-1, "Bad retina size setup : size height and with must be superior to zero", "Retina::setup", "Retina.h", 0);
unsigned int nbPixels=inputSize.height*inputSize.width;
// resize buffers if size does not match
_inputBuffer.resize(nbPixels*3); // buffer supports gray images but also 3 channels color buffers... (larger is better...)
unsigned int nbPixels=inputSize.height*inputSize.width;
// resize buffers if size does not match
_inputBuffer.resize(nbPixels*3); // buffer supports gray images but also 3 channels color buffers... (larger is better...)
// allocate the retina model
// allocate the retina model
if (_retinaFilter)
delete _retinaFilter;
_retinaFilter = new RetinaFilter(inputSize.height, inputSize.width, colorMode, colorSamplingMethod, useRetinaLogSampling, reductionFactor, samplingStrenght);
_retinaFilter = new RetinaFilter(inputSize.height, inputSize.width, colorMode, colorSamplingMethod, useRetinaLogSampling, reductionFactor, samplingStrenght);
// prepare the default parameter XML file with default setup
// prepare the default parameter XML file with default setup
setup(_retinaParameters);
// init retina
_retinaFilter->clearAllBuffers();
// init retina
_retinaFilter->clearAllBuffers();
// report current configuration
std::cout<<printSetup()<<std::endl;
// report current configuration
std::cout<<printSetup()<<std::endl;
}
void Retina::_convertValarrayBuffer2cvMat(const std::valarray<float> &grayMatrixToConvert, const unsigned int nbRows, const unsigned int nbColumns, const bool colorMode, cv::Mat &outBuffer)
{
// fill output buffer with the valarray buffer
const float *valarrayPTR=get_data(grayMatrixToConvert);
if (!colorMode)
{
outBuffer.create(cv::Size(nbColumns, nbRows), CV_8U);
for (unsigned int i=0;i<nbRows;++i)
{
for (unsigned int j=0;j<nbColumns;++j)
{
cv::Point2d pixel(j,i);
outBuffer.at<unsigned char>(pixel)=(unsigned char)*(valarrayPTR++);
}
}
}else
{
const unsigned int doubleNBpixels=_retinaFilter->getOutputNBpixels()*2;
outBuffer.create(cv::Size(nbColumns, nbRows), CV_8UC3);
for (unsigned int i=0;i<nbRows;++i)
{
for (unsigned int j=0;j<nbColumns;++j,++valarrayPTR)
{
cv::Point2d pixel(j,i);
cv::Vec3b pixelValues;
pixelValues[2]=(unsigned char)*(valarrayPTR);
pixelValues[1]=(unsigned char)*(valarrayPTR+_retinaFilter->getOutputNBpixels());
pixelValues[0]=(unsigned char)*(valarrayPTR+doubleNBpixels);
// fill output buffer with the valarray buffer
const float *valarrayPTR=get_data(grayMatrixToConvert);
if (!colorMode)
{
outBuffer.create(cv::Size(nbColumns, nbRows), CV_8U);
for (unsigned int i=0;i<nbRows;++i)
{
for (unsigned int j=0;j<nbColumns;++j)
{
cv::Point2d pixel(j,i);
outBuffer.at<unsigned char>(pixel)=(unsigned char)*(valarrayPTR++);
}
}
}else
{
const unsigned int doubleNBpixels=_retinaFilter->getOutputNBpixels()*2;
outBuffer.create(cv::Size(nbColumns, nbRows), CV_8UC3);
for (unsigned int i=0;i<nbRows;++i)
{
for (unsigned int j=0;j<nbColumns;++j,++valarrayPTR)
{
cv::Point2d pixel(j,i);
cv::Vec3b pixelValues;
pixelValues[2]=(unsigned char)*(valarrayPTR);
pixelValues[1]=(unsigned char)*(valarrayPTR+_retinaFilter->getOutputNBpixels());
pixelValues[0]=(unsigned char)*(valarrayPTR+doubleNBpixels);
outBuffer.at<cv::Vec3b>(pixel)=pixelValues;
}
}
}
outBuffer.at<cv::Vec3b>(pixel)=pixelValues;
}
}
}
}
bool Retina::_convertCvMat2ValarrayBuffer(const cv::Mat inputMatToConvert, std::valarray<float> &outputValarrayMatrix)
{
// first check input consistency
if (inputMatToConvert.empty())
throw cv::Exception(-1, "Retina cannot be applied, input buffer is empty", "Retina::run", "Retina.h", 0);
// first check input consistency
if (inputMatToConvert.empty())
throw cv::Exception(-1, "Retina cannot be applied, input buffer is empty", "Retina::run", "Retina.h", 0);
// retreive color mode from image input
int imageNumberOfChannels = inputMatToConvert.channels();
// retreive color mode from image input
int imageNumberOfChannels = inputMatToConvert.channels();
// convert to float AND fill the valarray buffer
typedef float T; // define here the target pixel format, here, float
typedef float T; // define here the target pixel format, here, float
const int dsttype = DataType<T>::depth; // output buffer is float format
if(imageNumberOfChannels==4)
if(imageNumberOfChannels==4)
{
// create a cv::Mat table (for RGBA planes)
cv::Mat planes[4] =
{
// create a cv::Mat table (for RGBA planes)
cv::Mat planes[] =
{
cv::Mat(inputMatToConvert.size(), dsttype, &outputValarrayMatrix[_retinaFilter->getInputNBpixels()*2]),
cv::Mat(inputMatToConvert.size(), dsttype, &outputValarrayMatrix[_retinaFilter->getInputNBpixels()]),
cv::Mat(inputMatToConvert.size(), dsttype, &outputValarrayMatrix[0]),
cv::Mat(inputMatToConvert.size(), dsttype) // last channel (alpha) does not point on the valarray (not usefull in our case)
};
// split color cv::Mat in 4 planes... it fills valarray directely
cv::split(cv::Mat_<Vec<T, 4> >(inputMatToConvert), planes);
}else if (imageNumberOfChannels==3)
{
// create a cv::Mat table (for RGB planes)
cv::Mat planes[] =
{
cv::Mat(inputMatToConvert.size(), dsttype, &outputValarrayMatrix[_retinaFilter->getInputNBpixels()*2]),
cv::Mat(inputMatToConvert.size(), dsttype, &outputValarrayMatrix[_retinaFilter->getInputNBpixels()]),
cv::Mat(inputMatToConvert.size(), dsttype, &outputValarrayMatrix[0])
};
// split color cv::Mat in 3 planes... it fills valarray directely
cv::split(cv::Mat_<Vec<T, 3> >(inputMatToConvert), planes);
}else if(imageNumberOfChannels==1)
{
// create a cv::Mat header for the valarray
cv::Mat dst(inputMatToConvert.size(), dsttype, &outputValarrayMatrix[0]);
inputMatToConvert.convertTo(dst, dsttype);
}
cv::Mat(inputMatToConvert.size(), dsttype, &outputValarrayMatrix[_retinaFilter->getInputNBpixels()*2]),
cv::Mat(inputMatToConvert.size(), dsttype, &outputValarrayMatrix[_retinaFilter->getInputNBpixels()]),
cv::Mat(inputMatToConvert.size(), dsttype, &outputValarrayMatrix[0])
};
planes[3] = cv::Mat(inputMatToConvert.size(), dsttype); // last channel (alpha) does not point on the valarray (not usefull in our case)
// split color cv::Mat in 4 planes... it fills valarray directely
cv::split(cv::Mat_<Vec<T, 4> >(inputMatToConvert), planes);
}
else if (imageNumberOfChannels==3)
{
// create a cv::Mat table (for RGB planes)
cv::Mat planes[] =
{
cv::Mat(inputMatToConvert.size(), dsttype, &outputValarrayMatrix[_retinaFilter->getInputNBpixels()*2]),
cv::Mat(inputMatToConvert.size(), dsttype, &outputValarrayMatrix[_retinaFilter->getInputNBpixels()]),
cv::Mat(inputMatToConvert.size(), dsttype, &outputValarrayMatrix[0])
};
// split color cv::Mat in 3 planes... it fills valarray directely
cv::split(cv::Mat_<Vec<T, 3> >(inputMatToConvert), planes);
}
else if(imageNumberOfChannels==1)
{
// create a cv::Mat header for the valarray
cv::Mat dst(inputMatToConvert.size(), dsttype, &outputValarrayMatrix[0]);
inputMatToConvert.convertTo(dst, dsttype);
}
else
CV_Error(CV_StsUnsupportedFormat, "input image must be single channel (gray levels), bgr format (color) or bgra (color with transparency which won't be considered");
return imageNumberOfChannels>1; // return bool : false for gray level image processing, true for color mode
}