Add Triangle thresholding algorithm

Add Triangle method for automatic threshold computation next to the existing
Otsu's method. Triangle deals better with images whose histogram does not
contain dominant peak.

See paper Zack GW, Rogers WE, Latt SA.: Automatic measurement of sister
chromatid exchange frequency. J Histochem Cytochem. 1977 Jul;25(7):741-53.
This commit is contained in:
Miroslav Benes
2014-10-22 16:54:39 +02:00
parent 322593e89f
commit 5b1fd739d9
5 changed files with 122 additions and 7 deletions

View File

@@ -986,6 +986,110 @@ getThreshVal_Otsu_8u( const Mat& _src )
return max_val;
}
static double
getThreshVal_Triangle_8u( const Mat& _src )
{
Size size = _src.size();
int step = (int) _src.step;
if( _src.isContinuous() )
{
size.width *= size.height;
size.height = 1;
step = size.width;
}
const int N = 256;
int i, j, h[N] = {0};
for( i = 0; i < size.height; i++ )
{
const uchar* src = _src.ptr() + step*i;
j = 0;
#if CV_ENABLE_UNROLLED
for( ; j <= size.width - 4; j += 4 )
{
int v0 = src[j], v1 = src[j+1];
h[v0]++; h[v1]++;
v0 = src[j+2]; v1 = src[j+3];
h[v0]++; h[v1]++;
}
#endif
for( ; j < size.width; j++ )
h[src[j]]++;
}
int left_bound = 0, right_bound = 0, max_ind = 0, max = 0;
int temp;
bool isflipped = false;
for( i = 0; i < N; i++ )
{
if( h[i] > 0 )
{
left_bound = i;
break;
}
}
if( left_bound > 0 )
left_bound--;
for( i = N-1; i > 0; i-- )
{
if( h[i] > 0 )
{
right_bound = i;
break;
}
}
if( right_bound < N-1 )
right_bound++;
for( i = 0; i < N; i++ )
{
if( h[i] > max)
{
max = h[i];
max_ind = i;
}
}
if( max_ind-left_bound < right_bound-max_ind)
{
isflipped = true;
i = 0, j = N-1;
while( i < j )
{
temp = h[i]; h[i] = h[j]; h[j] = temp;
i++; j--;
}
left_bound = N-1-right_bound;
max_ind = N-1-max_ind;
}
double thresh = left_bound;
double a, b, dist = 0, tempdist;
/*
* We do not need to compute precise distance here. Distance is maximized, so some constants can
* be omitted. This speeds up a computation a bit.
*/
a = max; b = left_bound-max_ind;
for( i = left_bound+1; i <= max_ind; i++ )
{
tempdist = a*i + b*h[i];
if( tempdist > dist)
{
dist = tempdist;
thresh = i;
}
}
thresh--;
if( isflipped )
thresh = N-1-thresh;
return thresh;
}
class ThresholdRunner : public ParallelLoopBody
{
public:
@@ -1086,6 +1190,7 @@ double cv::threshold( InputArray _src, OutputArray _dst, double thresh, double m
Mat src = _src.getMat();
bool use_otsu = (type & THRESH_OTSU) != 0;
bool use_triangle = (type & THRESH_TRIANGLE) != 0;
type &= THRESH_MASK;
if( use_otsu )
@@ -1094,6 +1199,12 @@ double cv::threshold( InputArray _src, OutputArray _dst, double thresh, double m
thresh = getThreshVal_Otsu_8u(src);
}
if( use_triangle )
{
CV_Assert( src.type() == CV_8UC1 );
thresh = getThreshVal_Triangle_8u(src);
}
_dst.create( src.size(), src.type() );
Mat dst = _dst.getMat();